Information for 6-CTTCAACC (Motif 6)


Reverse Opposite:

p-value:1e-17
log p-value:-4.020e+01
Information Content per bp:1.632
Number of Target Sequences with motif228.0
Percentage of Target Sequences with motif23.55%
Number of Background Sequences with motif81.4
Percentage of Background Sequences with motif8.97%
Average Position of motif in Targets36.7 +/- 19.7bp
Average Position of motif in Background34.0 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTTCAACC-
GCTTGAACAA

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:CTTCAACC--
TTTGAAACCG

ct/MA0218.1/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTTCAACC
-TTGAAC-

vnd/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---CTTCAACC
GCACTTGAGC-

vnd/MA0253.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CTTCAACC
CACTTGAAA-

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CTTCAACC
NCACTTGAAA-

ceh-22/MA0264.1/Jaspar

Match Rank:7
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTTCAACC
ACCACTTGAAA-

MA0264.1_ceh-22/Jaspar

Match Rank:8
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----CTTCAACC
ACCACTTGAAA-

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CTTCAACC
TGACCTTGACCT

pan/dmmpmm(Pollard)/fly

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTCAACC
CTTTGATC-