Information for 4-GWGATTCTCYTG (Motif 10)


Reverse Opposite:

p-value:1e-16
log p-value:-3.706e+01
Information Content per bp:1.711
Number of Target Sequences with motif86.0
Percentage of Target Sequences with motif4.91%
Number of Background Sequences with motif11.8
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets37.2 +/- 14.5bp
Average Position of motif in Background35.3 +/- 33.5bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ttk/MA0460.1/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GWGATTCTCYTG
---ATTATCCTT

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GWGATTCTCYTG----
----ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GWGATTCTCYTG----
----ATCACCTGAGGC

NAC92/MA1044.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GWGATTCTCYTG---
---NNTGGCGTGTNN

DYT1/MA0580.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWGATTCTCYTG-
CGTGAGTCACGTGA

ttk/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GWGATTCTCYTG-
TTNGATTATCCTTG

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GWGATTCTCYTG
GGGGATTCCCC--

Rel/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GWGATTCTCYTG
NGGGATTCCCC--

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GWGATTCTCYTG
AGGGGATTCCCCT-

INO2/MA0321.1/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GWGATTCTCYTG-
----TTCACATGC