Information for 6-CTCCHRCCTG (Motif 12)


Reverse Opposite:

p-value:1e-13
log p-value:-3.205e+01
Information Content per bp:1.530
Number of Target Sequences with motif118.0
Percentage of Target Sequences with motif6.74%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets37.6 +/- 16.5bp
Average Position of motif in Background29.7 +/- 21.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1/MA0103.2/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:CTCCHRCCTG
-CCTCACCTG

Tag/dmmpmm(Papatsenko)/fly

Match Rank:2
Score:0.69
Offset:3
Orientation:reverse strand
Alignment:CTCCHRCCTG
---CTACCTG

TBX15/MA0803.1/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:CTCCHRCCTG
-TCACACCT-

POL009.1_DCE_S_II/Jaspar

Match Rank:4
Score:0.68
Offset:6
Orientation:forward strand
Alignment:CTCCHRCCTG--
------GCTGTG

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCCHRCCTG----
--ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:6
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CTCCHRCCTG----
--ATCACCTGAGGC

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:7
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTCCHRCCTG-
-KBCTACCTGW

pros/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CTCCHRCCTG
--CATGNCT-

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CTCCHRCCTG--
--NNCACCTGNN

E2F6/MA0471.1/Jaspar

Match Rank:10
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTCCHRCCTG
NCTTCCCGCCC-