Information for 14-AGTAAGAATA (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.407e+01
Information Content per bp:1.833
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif3.54%
Number of Background Sequences with motif10.9
Percentage of Background Sequences with motif0.60%
Average Position of motif in Targets38.8 +/- 19.0bp
Average Position of motif in Background28.2 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

gt/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-AGTAAGAATA
ACGTAATAAT-

gt/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AGTAAGAATA
-GTAAAAA--

KANADI1(Myb)/Seedling-KAN1-ChIP-Seq(GSE48081)/Homer

Match Rank:3
Score:0.71
Offset:3
Orientation:forward strand
Alignment:AGTAAGAATA---
---ARGAATAWWN

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AGTAAGAATA-
-CTAAAAATAA

bab1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGTAAGAATA
AACAATAATA

Sox5/MA0087.1/Jaspar

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:AGTAAGAATA
--NAACAAT-

PEND/MA0127.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGTAAGAATA
AATAAGAAGT

br-Z2/dmmpmm(Down)/fly

Match Rank:8
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGTAAGAATA
---ATTAATA

gt/dmmpmm(SeSiMCMC)/fly

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGTAAGAATA
--TAAAAA--

YAP7/MA0419.1/Jaspar

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTAAGAATA
ATTAGTAAGCA--