Information for 9-TTTGTAKTWTTW (Motif 19)


Reverse Opposite:

p-value:1e-10
log p-value:-2.406e+01
Information Content per bp:1.766
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif2.86%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets39.7 +/- 19.2bp
Average Position of motif in Background47.8 +/- 7.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z1/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TTTGTAKTWTTW
TTAGTATT----

br-Z1/dmmpmm(SeSiMCMC)/fly

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-TTTGTAKTWTTW
ATTTGTATT----

ID1(C2H2(Zn))/Zea mays/AthaMap

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TTTGTAKTWTTW
TTTGTCGTTTT-

br-Z2/dmmpmm(Down)/fly

Match Rank:4
Score:0.65
Offset:4
Orientation:forward strand
Alignment:TTTGTAKTWTTW
----TATTAAT-

br-Z1/dmmpmm(Pollard)/fly

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:TTTGTAKTWTTW
-TTCTATTT---

AGL27/MA1012.1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTGTAKTWTTW-
ACTTTCTATTTTTGG

RLR1?/SacCer-Promoters/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TTTGTAKTWTTW
WTTTTCYYTTTT--

LIN54/MA0619.1/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTTGTAKTWTTW
ATTTGAATT----

ap/dmmpmm(Down)/fly

Match Rank:9
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:TTTGTAKTWTTW
----TATTATT-

Arid5a/MA0602.1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-TTTGTAKTWTTW-
NNTNNCAATATTAG