Information for 15-AGGRATGRRG (Motif 20)


Reverse Opposite:

p-value:1e-10
log p-value:-2.321e+01
Information Content per bp:1.604
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif3.20%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets40.3 +/- 19.0bp
Average Position of motif in Background28.2 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AGGRATGRRG
AGGAATG---

pros/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:AGGRATGRRG
AGNCATG---

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGGRATGRRG
NTGGAATGTG-

Unknown2/Drosophila-Promoters/Homer

Match Rank:4
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGGRATGRRG
TAGKGATG---

TEAD3/MA0808.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGGRATGRRG
TGGAATGT--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--AGGRATGRRG
NCTGGAATGC--

TEC1/MA0406.1/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AGGRATGRRG
GGGAATGT--

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGRATGRRG
CCWGGAATGY--

TEAD4/MA0809.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-AGGRATGRRG
NTGGAATGTN-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AGGRATGRRG
CCWGGAATGY--