Information for 22-CCCAAACCTC (Motif 26)


Reverse Opposite:

p-value:1e-7
log p-value:-1.665e+01
Information Content per bp:1.449
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif2.17%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets37.5 +/- 18.5bp
Average Position of motif in Background30.5 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ADR1/MA0268.1/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCAAACCTC
ACCCCAC-----

PCF/Arabidopsis-Promoters/Homer

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------CCCAAACCTC
NHHARGCCCAWWWNN-

Hr46/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCAAACCTC
TGACCCAATT---

MYB24/MA1037.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CCCAAACCTC
ACCTAACNN--

YPR022C/MA0436.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCAAACCTC
CCCCACG----

RREB1/MA0073.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCCAAACCTC---------
CCCCAAACCACCCCCCCCCA

HAP2/MA0313.1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCCAAACCTC
ACCAA-----

HAP2/Literature(Harbison)/Yeast

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCAAACCTC
-CCAAT----

HAP3/Literature(Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCAAACCTC
-CCAAT----

HAP5/Literature(Harbison)/Yeast

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCCAAACCTC
-CCAAT----