Information for 24-GAAATGGAAG (Motif 27)


Reverse Opposite:

p-value:1e-5
log p-value:-1.327e+01
Information Content per bp:1.833
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets34.3 +/- 17.3bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GAAATGGAAG-
GGAAGTGAAAST

HSF1/MA0319.1/Jaspar

Match Rank:2
Score:0.71
Offset:3
Orientation:forward strand
Alignment:GAAATGGAAG-
---ATGGAACA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--GAAATGGAAG
CGGAAGTGAAAC

AP1/MA0940.1/Jaspar

Match Rank:4
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GAAATGGAAG
CCAAAAATGGAA-

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GAAATGGAAG-
AGAAACGAAAGT

CST6(MacIsaac)/Yeast

Match Rank:6
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GAAATGGAAG
NAAATGCA--

br-Z1/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAAATGGAAG
-AAATAGAA-

GCR1/MA0304.1/Jaspar

Match Rank:8
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GAAATGGAAG--
----TGGAAGCC

GCR2/MA0305.1/Jaspar

Match Rank:9
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:GAAATGGAAG-
----NGGAAGC

SPT23/MA0388.1/Jaspar

Match Rank:10
Score:0.68
Offset:0
Orientation:forward strand
Alignment:GAAATGGAAG
GAAATCAA--