Information for 2-BTTGAAGTVA (Motif 4)


Reverse Opposite:

p-value:1e-23
log p-value:-5.460e+01
Information Content per bp:1.528
Number of Target Sequences with motif179.0
Percentage of Target Sequences with motif10.22%
Number of Background Sequences with motif41.5
Percentage of Background Sequences with motif2.29%
Average Position of motif in Targets40.6 +/- 19.2bp
Average Position of motif in Background33.7 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:BTTGAAGTVA
TTTCAAGTGA

vnd/MA0253.1/Jaspar

Match Rank:2
Score:0.76
Offset:0
Orientation:forward strand
Alignment:BTTGAAGTVA
TTTCAAGTG-

tin/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:BTTGAAGTVA
--TCAAGTG-

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:BTTGAAGTVA
-CTCAAGTG-

tin/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:BTTGAAGTVA
--TCAAGTG-

bap/MA0211.1/Jaspar

Match Rank:6
Score:0.70
Offset:2
Orientation:forward strand
Alignment:BTTGAAGTVA
--TTAAGTG-

ceh-22/MA0264.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:BTTGAAGTVA-
TTTCAAGTGGN

MA0264.1_ceh-22/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:BTTGAAGTVA-
TTTCAAGTGGN

NTL9/MA1046.1/Jaspar

Match Rank:9
Score:0.69
Offset:2
Orientation:forward strand
Alignment:BTTGAAGTVA-
--TTAAGTAAT

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:BTTGAAGTVA
-NTCAAGTGG