Information for 6-WDMAAATA (Motif 7)


Reverse Opposite:

p-value:1e-18
log p-value:-4.353e+01
Information Content per bp:1.597
Number of Target Sequences with motif563.0
Percentage of Target Sequences with motif32.15%
Number of Background Sequences with motif345.5
Percentage of Background Sequences with motif19.05%
Average Position of motif in Targets36.8 +/- 19.8bp
Average Position of motif in Background39.0 +/- 19.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bin/dmmpmm(Bergman)/fly

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:WDMAAATA
-ATAAATA

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.80
Offset:-2
Orientation:forward strand
Alignment:--WDMAAATA--
DCYAAAAATAGM

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-WDMAAATA-
CCAAAAATAG

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----WDMAAATA---
ATGCTAAAAATAGAA

Mef2/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-WDMAAATA-
CTAAAAATAA

SUM1/MA0398.1/Jaspar

Match Rank:6
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:WDMAAATA--
-AAAAATTTT

br(var.2)/MA0011.1/Jaspar

Match Rank:7
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:WDMAAATA---
---AAATAGTA

RLM1(MacIsaac)/Yeast

Match Rank:8
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--WDMAAATA
TCTATAAATA

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:9
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--WDMAAATA--
GCTAAAAATAGC

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--WDMAAATA--
KCCAAAAATAGC