Information for 4-CACCVYNCCC (Motif 8)


Reverse Opposite:

p-value:1e-18
log p-value:-4.204e+01
Information Content per bp:1.682
Number of Target Sequences with motif119.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif22.5
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets35.5 +/- 19.7bp
Average Position of motif in Background41.7 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CACCVYNCCC----
TCGACCCCGCCCCTAT

Klf4/MA0039.2/Jaspar

Match Rank:2
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CACCVYNCCC-
-GCCCCACCCA

KLF5/MA0599.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CACCVYNCCC-
-GCCCCGCCCC

SeqBias: polyC-repeat

Match Rank:4
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CACCVYNCCC
CCCCCCCCCC

SP3/MA0746.1/Jaspar

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:CACCVYNCCC--
-GCCACGCCCCC

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:CACCVYNCCC
--CCCCCCCC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CACCVYNCCC-
-GCCMCRCCCH

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CACCVYNCCC------
TCACCCCGCCCCAAATT

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CACCVYNCCC---
-GCCMCGCCCMCY

Klf1/MA0493.1/Jaspar

Match Rank:10
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CACCVYNCCC-
GGCCACACCCA