Information for 2-TDAAATATATAT (Motif 10)


Reverse Opposite:

p-value:1e-7
log p-value:-1.771e+01
Information Content per bp:1.707
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif1.88%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.33%
Average Position of motif in Targets35.4 +/- 18.5bp
Average Position of motif in Background26.9 +/- 15.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SeqBias: TA-repeat

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:TDAAATATATAT
-TATATATATA-

SPT15/MA0386.1/Jaspar

Match Rank:2
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----TDAAATATATAT-----
GACTAGATATATATATTCGAT

CCA1/MA0972.1/Jaspar

Match Rank:3
Score:0.74
Offset:2
Orientation:forward strand
Alignment:TDAAATATATAT
--AAATATCT--

PB0080.1_Tbp_1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TDAAATATATAT---
TCTTTATATATAAATA

Cf2/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TDAAATATATAT-
----GTATATATA

bab1/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:TDAAATATATAT-
-TAAATATAATTG

Cf2/MA0015.1/Jaspar

Match Rank:7
Score:0.69
Offset:4
Orientation:forward strand
Alignment:TDAAATATATAT--
----GTATATATAC

NHP6B/MA0346.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---TDAAATATATAT-----
NNNTATTATATATANNNANA

cad/dmmpmm(Down)/fly

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TDAAATATATAT
--AAAAATTT--

slp1/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TDAAATATATAT-
---AATATTTACA