Information for 12-AAGATAGAAG (Motif 13)


Reverse Opposite:

p-value:1e-7
log p-value:-1.719e+01
Information Content per bp:1.654
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets35.8 +/- 20.8bp
Average Position of motif in Background33.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br-Z1/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.72
Offset:1
Orientation:forward strand
Alignment:AAGATAGAAG
-AAATAGAA-

pan/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGATAGAAG-
AAGATCAAAGG

SFL1/MA0377.1/Jaspar

Match Rank:3
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAGATAGAAG--------
TAGAGAATAGAAGAAATAAAA

Tcf7/MA0769.1/Jaspar

Match Rank:4
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-AAGATAGAAG-
AAAGATCAAAGG

LEF1/MA0768.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGATAGAAG----
AAAGATCAAAGGGTT

br(var.2)/MA0011.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAGATAGAAG
-AAATAGTA-

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGATAGAAG
-AGATAAGA-

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AAGATAGAAG
ATGCTAAAAATAGAA-

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAGATAGAAG
-AGATAASR-

Mecom/MA0029.1/Jaspar

Match Rank:10
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----AAGATAGAAG
AAGATAAGATAACA-