Information for 3-TCTMAAAWAAAA (Motif 14)


Reverse Opposite:

p-value:1e-7
log p-value:-1.677e+01
Information Content per bp:1.678
Number of Target Sequences with motif104.0
Percentage of Target Sequences with motif4.25%
Number of Background Sequences with motif44.6
Percentage of Background Sequences with motif1.73%
Average Position of motif in Targets34.9 +/- 19.6bp
Average Position of motif in Background39.5 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0116.1_Elf3_2/Jaspar

Match Rank:1
Score:0.78
Offset:0
Orientation:forward strand
Alignment:TCTMAAAWAAAA-----
GTTCAAAAAAAAAATTC

PB0182.1_Srf_2/Jaspar

Match Rank:2
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TCTMAAAWAAAA----
GTTAAAAAAAAAAATTA

SeqBias: polyA-repeat

Match Rank:3
Score:0.77
Offset:2
Orientation:forward strand
Alignment:TCTMAAAWAAAA
--AAAAAAAAAA

PB0093.1_Zfp105_1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:forward strand
Alignment:TCTMAAAWAAAA----
-AACAAACAACAAGAG

hb/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.72
Offset:2
Orientation:forward strand
Alignment:TCTMAAAWAAAA--
--ACNAAAAAAACA

croc/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.71
Offset:6
Orientation:forward strand
Alignment:TCTMAAAWAAAA
------ATAAAA

PH0078.1_Hoxd13/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:TCTMAAAWAAAA----
CTACCAATAAAATTCT

hb/dmmpmm(Down)/fly

Match Rank:8
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:TCTMAAAWAAAA
---CATAAAAAA

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TCTMAAAWAAAA-
TACTGGAAAAAAAA

zen/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.69
Offset:5
Orientation:forward strand
Alignment:TCTMAAAWAAAA
-----AATAAA-