Information for 13-CCACCCCTTT (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.628e+01
Information Content per bp:1.844
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets42.6 +/- 16.9bp
Average Position of motif in Background24.1 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MSN2/MSN2_H2O2Hi/1-MSN2(Harbison)/Yeast

Match Rank:1
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:CCACCCCTTT
CCGCCCCTT-

PB0110.1_Bcl6b_2/Jaspar

Match Rank:2
Score:0.79
Offset:-4
Orientation:forward strand
Alignment:----CCACCCCTTT--
ATCCCCGCCCCTAAAA

MSN4/Literature(Harbison)/Yeast

Match Rank:3
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:CCACCCCTTT
--NCCCCTG-

GIS1/MA0306.1/Jaspar

Match Rank:4
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CCACCCCTTT-
--ACCCCTAAA

YER130C/MA0423.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:forward strand
Alignment:CCACCCCTTT-
--ACCCCTATT

MSN4(MacIsaac)/Yeast

Match Rank:6
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:CCACCCCTTT
--CCCCCTT-

MSN4/MA0342.1/Jaspar

Match Rank:7
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCACCCCTTT
---CCCCT--

RGM1/MA0366.1/Jaspar

Match Rank:8
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:CCACCCCTTT
---CCCCT--

MSN2/MA0341.1/Jaspar

Match Rank:9
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CCACCCCTTT
---CCCCT--

RPH1/MA0372.1/Jaspar

Match Rank:10
Score:0.73
Offset:2
Orientation:forward strand
Alignment:CCACCCCTTT
--ACCCCTAA