Information for 5-ATTTTRTGTTTT (Motif 16)


Reverse Opposite:

p-value:1e-6
log p-value:-1.581e+01
Information Content per bp:1.780
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif3.11%
Number of Background Sequences with motif27.4
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets35.3 +/- 21.2bp
Average Position of motif in Background32.4 +/- 16.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RLR1?/SacCer-Promoters/Homer

Match Rank:1
Score:0.79
Offset:0
Orientation:forward strand
Alignment:ATTTTRTGTTTT
WTTTTCYYTTTT

cad/dmmpmm(Bigfoot)/fly

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:ATTTTRTGTTTT
--TTTATGNTT-

br-Z2/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:ATTTTRTGTTTT
-TTAACTATTT-

SeqBias: polyA-repeat

Match Rank:4
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:ATTTTRTGTTTT
-TTTTTTTTTT-

AGL27/MA1012.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTTTRTGTTTT---
ACTTTCTATTTTTGG

Abd-B/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ATTTTRTGTTTT
-TTTTATGA---

br-Z1/dmmpmm(Pollard)/fly

Match Rank:7
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:ATTTTRTGTTTT
---TTCTATTT-

FLC/MA0558.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTRTGTTTT--------
NNCTTTCTATTTTTGGNAANT

pan/dmmpmm(Down)/fly

Match Rank:9
Score:0.67
Offset:6
Orientation:reverse strand
Alignment:ATTTTRTGTTTT-
------TGTTTTT

blmp-1/MA0537.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATTTTRTGTTTT
-TTTTCNCTTTT