Information for 16-CGTGTGCATG (Motif 17)


Reverse Opposite:

p-value:1e-6
log p-value:-1.446e+01
Information Content per bp:1.672
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif0.82%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.3 +/- 16.1bp
Average Position of motif in Background50.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

LEC2/MA0581.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:CGTGTGCATG--
-ATGTGCATGNN

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:2
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:CGTGTGCATG--
--TTTGCATGGA

PB0044.1_Mtf1_1/Jaspar

Match Rank:3
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----CGTGTGCATG--
GGGCCGTGTGCAAAAA

RBFox2(?)/Heart-RBFox2-CLIP-Seq(GSE57926)/Homer

Match Rank:4
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CGTGTGCATG--
----TGCATGCA

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGTGTGCATG-
-CTGTTCCTGG

PB0208.1_Zscan4_2/Jaspar

Match Rank:6
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGTGCATG-
NNNNTTGTGTGCTTNN

unc-86/MA0926.1/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CGTGTGCATG
-ATATGCAT-

ABI3/MA0564.1/Jaspar

Match Rank:8
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CGTGTGCATG---
----TGCATGCAG

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----CGTGTGCATG-
NNGCGTGTGTGCNGCN

RCS1(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CGTGTGCATG
-GGGTGCA--