Information for 7-TTTTATTYTCTT (Motif 18)


Reverse Opposite:

p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.791
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets36.7 +/- 16.8bp
Average Position of motif in Background32.0 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0075.1_Hoxd10/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----TTTTATTYTCTT
NTNAATTTTATTGNATT

croc/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TTTTATTYTCTT
TTTTAT------

zen/dmmpmm(Bigfoot)/fly

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:TTTTATTYTCTT
-TTTATT-----

br-Z1/dmmpmm(Down)/fly

Match Rank:4
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TTTTATTYTCTT
TATTATTAT---

PH0046.1_Hoxa10/Jaspar

Match Rank:5
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----TTTTATTYTCTT
TNAATTTTATTACCTN

PH0013.1_Cdx2/Jaspar

Match Rank:6
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATTYTCTT-
NAATTTTATTACCNNN

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTTTATTYTCTT-
NAATTTTATTACCTNN

zen/dmmpmm(Down)/fly

Match Rank:8
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTATTYTCTT
-TTTATTTTTAT

Mecom/MA0029.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TTTTATTYTCTT
TNTTATCTTATCTT

PABPC1(?)/MEL-PABC1-CLIP-Seq(GSE69755)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TTTTATTYTCTT
NNCTTTATTD----