Information for 8-CACKKTGG (Motif 22)


Reverse Opposite:

p-value:1e-3
log p-value:-7.831e+00
Information Content per bp:1.646
Number of Target Sequences with motif73.0
Percentage of Target Sequences with motif2.98%
Number of Background Sequences with motif40.8
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets37.0 +/- 21.2bp
Average Position of motif in Background40.2 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

bZIP68/MA0968.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CACKKTGG
GCCACGTNN-

BIM1/MA0964.1/Jaspar

Match Rank:2
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CACKKTGG
NNNCACGTGN-

Arnt/MA0004.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACKKTGG
CACGTG--

prd-PD/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CACKKTGG---
TNTCGTCACGGTTGACA

DOF2.5/MA0977.1/Jaspar

Match Rank:5
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CACKKTGG
CACTTTTT

POL002.1_INR/Jaspar

Match Rank:6
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CACKKTGG
TCAGTCTT-

MET31/Literature(Harbison)/Yeast

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACKKTGG
AAACTGTGG

MET32/Literature(Harbison)/Yeast

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CACKKTGG
AAACTGTGG

HAC1/Literature(Harbison)/Yeast

Match Rank:9
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CACKKTGG--
GACACGCTGGCA

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:10
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CACKKTGG
GCCCCACCTC--