Information for 3-TCATCATCTA (Motif 3)


Reverse Opposite:

p-value:1e-10
log p-value:-2.339e+01
Information Content per bp:1.637
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif0.80%
Average Position of motif in Targets37.4 +/- 20.2bp
Average Position of motif in Background31.1 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

skn-1/MA0547.1/Jaspar

Match Rank:1
Score:0.78
Offset:-5
Orientation:reverse strand
Alignment:-----TCATCATCTA
AATTGTCATCATTTT

PB0176.1_Sox5_2/Jaspar

Match Rank:2
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TCATCATCTA---
TATCATAATTAAGGA

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----TCATCATCTA-
HWWGTCAGCAWWTTT

Mafb/MA0117.2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TCATCATCTA
NGTCAGCANTTT

MAFK/MA0496.1/Jaspar

Match Rank:5
Score:0.70
Offset:-5
Orientation:forward strand
Alignment:-----TCATCATCTA
CTGAGTCAGCAATTT

MAFF/MA0495.1/Jaspar

Match Rank:6
Score:0.68
Offset:-6
Orientation:forward strand
Alignment:------TCATCATCTA--
GCTGAGTCAGCAATTTTT

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TCATCATCTA
GTCAGCANNTN

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TCATCATCTA--
AAGTCAGCANTTTTN

JUN/MA0488.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCATCATCTA
ATGACATCATCNN

Tal1

Match Rank:10
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCATCATCTA
----CATCTG