Information for 7-CCTCAKCCTC (Motif 7)


Reverse Opposite:

p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.622
Number of Target Sequences with motif253.0
Percentage of Target Sequences with motif10.34%
Number of Background Sequences with motif150.3
Percentage of Background Sequences with motif5.82%
Average Position of motif in Targets37.9 +/- 18.5bp
Average Position of motif in Background37.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CCTCAKCCTC
---CAGCCAC

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:2
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAKCCTC-
ACCACATCCTGT

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCTCAKCCTC-
GCCCCGCCCCC

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCTCAKCCTC
--CCAGCA--

KLF5/MA0599.1/Jaspar

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCTCAKCCTC
GCCCCGCCCC-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CCTCAKCCTC
CCCCCCCC--

CRZ1/MA0285.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCTCAKCCTC
-CTAAGCCAC

Klf4/MA0039.2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAKCCTC
GCCCCACCCA-

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CCTCAKCCTC--
NAGCCCCGCCCCCN

Unknown4/Arabidopsis-Promoters/Homer

Match Rank:10
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTCAKCCTC
CKTCKTCTTY