Information for 8-CAGGATCTTG (Motif 8)


Reverse Opposite:

p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.653
Number of Target Sequences with motif64.0
Percentage of Target Sequences with motif2.62%
Number of Background Sequences with motif16.9
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets35.1 +/- 19.3bp
Average Position of motif in Background28.5 +/- 16.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ttk/dmmpmm(Pollard)/fly

Match Rank:1
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATCTTG
GCCAGGACCTCG

ARR2/MA0949.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CAGGATCTTG
GCGAATCTTT

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--CAGGATCTTG
ANCAGGATGT--

ttk/dmmpmm(Bigfoot)/fly

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:CAGGATCTTG
CAGGACC---

ARR10/MA0121.1/Jaspar

Match Rank:5
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGGATCTTG
GCGGATCT--

ttk/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CAGGATCTTG
GCAGGACC---

ttk/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGGATCTTG
GCCAGGACC---

ECM23/MA0293.1/Jaspar

Match Rank:8
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-CAGGATCTTG
NNNAGATCTNN

ARR1/MA0945.1/Jaspar

Match Rank:9
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CAGGATCTTG
AGCGAATCTT-

GAT4/MA0302.1/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CAGGATCTTG
NNTAGATCTNN