Information for 9-GGCAGAAAGT (Motif 9)


Reverse Opposite:

p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.841
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif1.06%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets34.4 +/- 19.5bp
Average Position of motif in Background59.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Eip74EF/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GGCAGAAAGT
--CAGGAAGT

SUM1(MacIsaac)/Yeast

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----GGCAGAAAGT
ANGCGTCAGTAAAT

DOF2.5/MA0977.1/Jaspar

Match Rank:3
Score:0.65
Offset:3
Orientation:forward strand
Alignment:GGCAGAAAGT-
---AAAAAGTG

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:GGCAGAAAGT-
-ACAGGAAGTG

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GGCAGAAAGT-
-ACAGGAAGTG

CDF2/MA0973.1/Jaspar

Match Rank:6
Score:0.64
Offset:2
Orientation:forward strand
Alignment:GGCAGAAAGT--
--AAAAAAGTGA

SUM1/SUM1_YPD/16-SUM1(Harbison)/Yeast

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GGCAGAAAGT
GCGTCAGAAAA-

Dof3/MA0021.1/Jaspar

Match Rank:8
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGCAGAAAGT-
-----AAAGCG

CDF3/MA0974.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GGCAGAAAGT--
---AAAAAGTGC

PBF/MA0064.1/Jaspar

Match Rank:10
Score:0.62
Offset:5
Orientation:forward strand
Alignment:GGCAGAAAGT
-----AAAGC