Information for 5-GCKTGANC (Motif 10)


Reverse Opposite:

p-value:1e-19
log p-value:-4.501e+01
Information Content per bp:1.435
Number of Target Sequences with motif95.0
Percentage of Target Sequences with motif6.18%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets34.4 +/- 18.2bp
Average Position of motif in Background36.9 +/- 7.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Ct/dmmpmm(Noyes_hd)/fly

Match Rank:1
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCKTGANC--
GCTTGAACAA

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCKTGANC
TGCGTG---

EGR2/MA0472.2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCKTGANC--
TGCGTGGGCGT

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GCKTGANC-
---TGACCT

EGR3/MA0732.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GCKTGANC----
ANTGCGTGGGCGTNN

WRKY63/MA1092.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCKTGANC-
-GTTGACCN

RTG3/Literature(Harbison)/Yeast

Match Rank:7
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GCKTGANC
--GTGACC

ct/MA0218.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCKTGANC
--TTGAAC

hkb/MA0450.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCKTGANC
GGGGCGTGA--

Klf12/MA0742.1/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GCKTGANC
NANAAGGGCGTGGTC