Information for 11-GGGGTTTCACCA (Motif 15)


Reverse Opposite:

p-value:1e-10
log p-value:-2.432e+01
Information Content per bp:1.779
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets36.3 +/- 21.3bp
Average Position of motif in Background20.2 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

dl/dmmpmm(Noyes)/fly

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GGGGTTTCACCA
GGGTTTTCCCNG

PH0162.1_Six2/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GGGGTTTCACCA--
AATGGGGTATCACGTTT

Dorsal(RHD)/Embryo-dl-ChIP-Seq(GSE65441)/Homer

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTTTCACCA
CGGGKTTTTCCC-

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:4
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGGTTTCACCA
GGGGATTCCCCC

shn-ZFP2/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGGGTTTCACCA
GGGAATTCCCC-

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GGGGTTTCACCA
GGGGAATCCCC-

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGGTTTCACCA
AGGGGAATCCCCT

Six3/MA0631.1/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGGTTTCACCA--
GATAGGGTATCACTAAT

PH0163.1_Six3/Jaspar

Match Rank:9
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GGGGTTTCACCA--
GATAGGGTATCACTAAT

dl/MA0022.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGGTTTCACCA
GGGGTTTTTCCC-