Information for 17-NCACAGTCCH (Motif 16)


Reverse Opposite:

p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.392
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif3.64%
Number of Background Sequences with motif8.3
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets36.4 +/- 18.8bp
Average Position of motif in Background30.6 +/- 13.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MET28/MA0332.1/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:NCACAGTCCH
CCACAG----

MET28(MacIsaac)/Yeast

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:NCACAGTCCH
CCACAG----

TEC1/MA0406.1/Jaspar

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:NCACAGTCCH
--ACATTCCC

TEAD1/MA0090.2/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:NCACAGTCCH-
-CACATTCCAT

TEAD4/MA0809.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NCACAGTCCH-
-CACATTCCAT

TEC1(MacIsaac)/Yeast

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:NCACAGTCCH
-CACATTCT-

PB0134.1_Hnf4a_2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--NCACAGTCCH----
GGCAAAAGTCCAATAA

POL009.1_DCE_S_II/Jaspar

Match Rank:8
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:NCACAGTCCH
-CACAGN---

TEC1/TEC1_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:NCACAGTCCH
---CATTCCT

MET4(MacIsaac)/Yeast

Match Rank:10
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:NCACAGTCCH
CCACAGTT--