Information for 18-ATCACGCCAC (Motif 17)


Reverse Opposite:

p-value:1e-9
log p-value:-2.143e+01
Information Content per bp:1.693
Number of Target Sequences with motif58.0
Percentage of Target Sequences with motif3.77%
Number of Background Sequences with motif9.9
Percentage of Background Sequences with motif0.67%
Average Position of motif in Targets42.4 +/- 18.4bp
Average Position of motif in Background28.7 +/- 17.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.92
Offset:0
Orientation:forward strand
Alignment:ATCACGCCAC
ATCACCCCAT

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.91
Offset:-2
Orientation:forward strand
Alignment:--ATCACGCCAC
CNGTCACGCCAC

SREBF1/MA0595.1/Jaspar

Match Rank:3
Score:0.90
Offset:0
Orientation:forward strand
Alignment:ATCACGCCAC
ATCACCCCAC

SREBF2/MA0596.1/Jaspar

Match Rank:4
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:ATCACGCCAC
ATCACCCCAT

hkb/MA0450.1/Jaspar

Match Rank:5
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:ATCACGCCAC
-TCACGCCCC

hkb/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-ATCACGCCAC-
CNTCACGCCCCC

MET31/MA0333.1/Jaspar

Match Rank:7
Score:0.72
Offset:4
Orientation:reverse strand
Alignment:ATCACGCCAC---
----CGCCACANN

RPN4/MA0373.1/Jaspar

Match Rank:8
Score:0.71
Offset:4
Orientation:reverse strand
Alignment:ATCACGCCAC-
----CGCCACC

MET32/MA0334.1/Jaspar

Match Rank:9
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ATCACGCCAC-
----CGCCACA

YPR022C/MA0436.1/Jaspar

Match Rank:10
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ATCACGCCAC-
----CCCCACG