Information for 12-CACCACTGCCCT (Motif 18)


Reverse Opposite:

p-value:1e-9
log p-value:-2.100e+01
Information Content per bp:1.712
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif2.28%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets38.6 +/- 14.4bp
Average Position of motif in Background28.6 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--CACCACTGCCCT---
AATCGCACTGCATTCCG

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CACCACTGCCCT
GCCCCACCTC---

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CACCACTGCCCT
ATCCAC------

Unknown2/Drosophila-Promoters/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACCACTGCCCT
CATCMCTA----

Run/dmmpmm(Papatsenko)/fly

Match Rank:5
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CACCACTGCCCT
---CACCGCC--

MSN4/Literature(Harbison)/Yeast

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CACCACTGCCCT
-NCCCCTG----

ABI4(1)(AP2/EREBP)/Zea mays/AthaMap

Match Rank:7
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CACCACTGCCCT-
---CACCGCCCCC

REI1/MA0364.1/Jaspar

Match Rank:8
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CACCACTGCCCT
--CCCCTGA---

THAP1/MA0597.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CACCACTGCCCT--
-----CTGCCCGCA

RPN4/MA0373.1/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CACCACTGCCCT
CGCCACC-----