Information for 13-CTACTTCT (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.089e+01
Information Content per bp:1.891
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif4.94%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif1.24%
Average Position of motif in Targets39.4 +/- 17.6bp
Average Position of motif in Background36.5 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

br(var.2)/MA0011.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--CTACTTCT
TACTATTT--

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CTACTTCT---
KCTATTTTTRGH

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CTACTTCT---
GCTATTTTTGGM

MEF2C/MA0497.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CTACTTCT-----
TTCTATTTTTAGNNN

br-Z2/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CTACTTCT
CTATTTA-

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CTACTTCT---
GCTATTTTTAGC

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CTACTTCT--
CTATTTTTGG

OdsH/MA0198.1/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:CTACTTCT
CTAATTA-

MEF2D/MA0773.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTACTTCT---
TCTATTTATAGN

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-CTACTTCT---
TCTATTTTTAGA