Information for 2-TCAGCCTCCC (Motif 2)


Reverse Opposite:

p-value:1e-29
log p-value:-6.693e+01
Information Content per bp:1.880
Number of Target Sequences with motif218.0
Percentage of Target Sequences with motif14.18%
Number of Background Sequences with motif45.8
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets36.9 +/- 19.1bp
Average Position of motif in Background38.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.79
Offset:1
Orientation:reverse strand
Alignment:TCAGCCTCCC
-CAGCCAC--

CRZ1/MA0285.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TCAGCCTCCC
CTAAGCCAC--

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TCAGCCTCCC
CCAGCA----

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCAGCCTCCC
GCTCGGSCTC--

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:5
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TCAGCCTCCC
ACGTCAGCACCC-

ADR1/Literature(Harbison)/Yeast

Match Rank:6
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCAGCCTCCC
----ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:7
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TCAGCCTCCC
----ACCCCN

GCR2(MacIsaac)/Yeast

Match Rank:8
Score:0.63
Offset:3
Orientation:forward strand
Alignment:TCAGCCTCCC
---GCTTCCN

GCR2/MA0305.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCAGCCTCCC
---GCTTCCT

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCAGCCTCCC-----
TACGAGACTCCTCTAAC