Information for 4-ATCTCCTGCC (Motif 5)


Reverse Opposite:

p-value:1e-22
log p-value:-5.205e+01
Information Content per bp:1.664
Number of Target Sequences with motif112.0
Percentage of Target Sequences with motif7.29%
Number of Background Sequences with motif10.5
Percentage of Background Sequences with motif0.70%
Average Position of motif in Targets35.5 +/- 15.2bp
Average Position of motif in Background43.4 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATCTCCTGCC
ATTTCCTGTN

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:ATCTCCTGCC
ATTTCCTGTN

ttk/dmmpmm(Papatsenko)/fly

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:ATCTCCTGCC
-GGTCCTGCC

ttk/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--ATCTCCTGCC
CAAGGTCCTGGC

RAV1(2)(AP2/EREBP)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCTCCTGCC--
ATCACCTGAGGC

RAV1(var.2)/MA0583.1/Jaspar

Match Rank:6
Score:0.66
Offset:0
Orientation:forward strand
Alignment:ATCTCCTGCC--
ATCACCTGAGGC

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ATCTCCTGCC
CACTTCCTGT-

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--ATCTCCTGCC
NNAYTTCCTGHN

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCTCCTGCC-
VDTTTCCCGCCA

ttk/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATCTCCTGCC
-GGTCCTG--