Information for 6-ATTACAGGCW (Motif 9)


Reverse Opposite:

p-value:1e-20
log p-value:-4.784e+01
Information Content per bp:1.747
Number of Target Sequences with motif108.0
Percentage of Target Sequences with motif7.03%
Number of Background Sequences with motif11.2
Percentage of Background Sequences with motif0.75%
Average Position of motif in Targets38.7 +/- 18.7bp
Average Position of motif in Background35.9 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MATALPHA2/MA0328.2/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:ATTACAGGCW
ATTACACG--

HMRA2/MA0318.1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:ATTACAGGCW
ATTACATG--

ems/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--ATTACAGGCW
TAATGACA----

GAT3(MacIsaac)/Yeast

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:ATTACAGGCW
ATAACATG--

ap/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--ATTACAGGCW
NNATTA------

PH0084.1_Irx3_2/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAGGCW----
NNTATTACATGTANNNT

PH0083.1_Irx3_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAGGCW----
ANTATTACATGTANNNN

Hgtx/dmmpmm(Noyes_hd)/fly

Match Rank:8
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAGGCW
NTAATTAAAN---

Oct/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ATTACAGGCW
NTAATTAAAN---

ara/dmmpmm(Noyes_hd)/fly

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATTACAGGCW
AAATAACAAA--