Information for 1-TGTAATCYCAGC (Motif 1)


Reverse Opposite:

p-value:1e-33
log p-value:-7.783e+01
Information Content per bp:1.644
Number of Target Sequences with motif320.0
Percentage of Target Sequences with motif13.07%
Number of Background Sequences with motif94.8
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets38.5 +/- 18.2bp
Average Position of motif in Background38.4 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTAATCYCAGC-
--AAATCACAGCA

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.71
Offset:2
Orientation:forward strand
Alignment:TGTAATCYCAGC
--AAATCACTGC

Su(H)/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TGTAATCYCAGC
----CTCCCAC-

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.67
Offset:7
Orientation:reverse strand
Alignment:TGTAATCYCAGC-
-------CCAGCA

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:TGTAATCYCAGC
--HTTTCCCASG

PB0098.1_Zfp410_1/Jaspar

Match Rank:6
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TGTAATCYCAGC---
NNNTCCATCCCATAANN

TOD6?/SacCer-Promoters/Homer

Match Rank:7
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:TGTAATCYCAGC--
----AKCTCATCGC

PDR8/MA0354.1/Jaspar

Match Rank:8
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:TGTAATCYCAGC
----ATCTCCGN

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:9
Score:0.63
Offset:5
Orientation:reverse strand
Alignment:TGTAATCYCAGC---
-----DCTCAGCAGG

ACE2/MA0267.1/Jaspar

Match Rank:10
Score:0.62
Offset:6
Orientation:forward strand
Alignment:TGTAATCYCAGC-
------ACCAGCA