Information for 11-CTAGGTAG (Motif 13)


Reverse Opposite:

p-value:1e-13
log p-value:-3.113e+01
Information Content per bp:1.598
Number of Target Sequences with motif301.0
Percentage of Target Sequences with motif12.30%
Number of Background Sequences with motif156.9
Percentage of Background Sequences with motif6.19%
Average Position of motif in Targets37.3 +/- 20.4bp
Average Position of motif in Background35.5 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Tag/dmmpmm(Papatsenko)/fly

Match Rank:1
Score:0.81
Offset:1
Orientation:forward strand
Alignment:CTAGGTAG
-CAGGTAG

MOT3/Literature(Harbison)/Yeast

Match Rank:2
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CTAGGTAG
-NAGGCA-

MOT3(MacIsaac)/Yeast

Match Rank:3
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CTAGGTAG
-NAGGCA-

MOT3/MA0340.1/Jaspar

Match Rank:4
Score:0.78
Offset:1
Orientation:forward strand
Alignment:CTAGGTAG
-AAGGCA-

MYB3/MA1038.1/Jaspar

Match Rank:5
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTAGGTAG-
AGGTAGGTAGA

MYB59/MA1042.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTAGGTAG
GTTAGGTA-

MYB111/MA1036.1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CTAGGTAG
GGTAGGTA-

Zelda(Zf)/Embryo-zld-ChIP-Seq(GSE65441)/Homer

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:CTAGGTAG--
WCAGGTAGVM

MYB46/MA1040.1/Jaspar

Match Rank:9
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-CTAGGTAG
GTTAGGTA-

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CTAGGTAG-----
NNNTTAGGTAGCNTNT