Information for 12-CWCAKCTCASTG (Motif 16)


Reverse Opposite:

p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.769
Number of Target Sequences with motif63.0
Percentage of Target Sequences with motif2.57%
Number of Background Sequences with motif9.4
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets38.3 +/- 24.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

TOD6?/SacCer-Promoters/Homer

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CWCAKCTCASTG
AKCTCATCGC----

pros/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CWCAKCTCASTG
CATGNCT-----

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CWCAKCTCASTG-
GTCATGCHTGRCTGS

toy/dmmpmm(Pollard)/fly

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CWCAKCTCASTG--
--CCACTCACTCAT

CDC5(MYB)/Arabidopsis thaliana/AthaMap

Match Rank:5
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CWCAKCTCASTG--
---GGCTCAGCGCG

CDC5/MA0579.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CWCAKCTCASTG--
---GGCTCAGCGCG

PB0099.1_Zfp691_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CWCAKCTCASTG-
CGAACAGTGCTCACTAT

HAP5/MA0316.1/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CWCAKCTCASTG--
TGGGATCTGATTGGT

CHA4(MacIsaac)/Yeast

Match Rank:9
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CWCAKCTCASTG
CTCATCGCA---

GATA11/MA1014.1/Jaspar

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CWCAKCTCASTG
CAGATCTA----