Information for 14-GCAAATGAAA (Motif 17)


Reverse Opposite:

p-value:1e-10
log p-value:-2.379e+01
Information Content per bp:1.810
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets36.5 +/- 16.8bp
Average Position of motif in Background32.2 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GCAAATGAAA--
GGAAGTGAAAST

Oct6(POU,Homeobox)/NPC-Oct6-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GCAAATGAAA
WATGCAAATGAG-

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----GCAAATGAAA
ATATGCAAATNNN-

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GCAAATGAAA
TTGTATGCAAATTAGA

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:5
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCAAATGAAA--
GAAAGTGAAAGT

Pou2f3/MA0627.1/Jaspar

Match Rank:6
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GCAAATGAAA
TTGTATGCAAATTAGA

PH0145.1_Pou2f3/Jaspar

Match Rank:7
Score:0.70
Offset:-6
Orientation:forward strand
Alignment:------GCAAATGAAA
TTGTATGCAAATTAGA

PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCAAATGAAA-
CGGAAGTGAAAC

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:9
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCAAATGAAA----
GGAAANTGAAACTNA

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GCAAATGAAA--
GAAACTGAAACT