Information for 13-AAABTAGAAAWA (Motif 18)


Reverse Opposite:

p-value:1e-10
log p-value:-2.312e+01
Information Content per bp:1.663
Number of Target Sequences with motif75.0
Percentage of Target Sequences with motif3.06%
Number of Background Sequences with motif17.9
Percentage of Background Sequences with motif0.71%
Average Position of motif in Targets33.2 +/- 16.8bp
Average Position of motif in Background39.6 +/- 14.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

AGL27/MA1012.1/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---AAABTAGAAAWA
CCAAAAATAGAAAGT

FLC/MA0558.1/Jaspar

Match Rank:2
Score:0.72
Offset:-8
Orientation:forward strand
Alignment:--------AAABTAGAAAWA-
AATTTCCAAAAATAGAAAGAA

kni/dmmpmm(SeSiMCMC)/fly

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-AAABTAGAAAWA
AAAACTGGAACAA

RLR1?/SacCer-Promoters/Homer

Match Rank:4
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:AAABTAGAAAWA
AAAARRGAAAAW

kni/dmmpmm(Bigfoot)/fly

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-AAABTAGAAAWA
AAAANTGGANCAA

br-Z1/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AAABTAGAAAWA
-AAATAGAA---

br-Z2/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:AAABTAGAAAWA
-AAATAGAAAA-

PI/MA0559.1/Jaspar

Match Rank:8
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AAABTAGAAAWA
CCAAAAAAGGAAAA-

blmp-1/MA0537.1/Jaspar

Match Rank:9
Score:0.68
Offset:0
Orientation:forward strand
Alignment:AAABTAGAAAWA
AAAAGTGAAAA-

br(var.2)/MA0011.1/Jaspar

Match Rank:10
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AAABTAGAAAWA
-AAATAGTA---