Information for 16-AAGCATTT (Motif 19)


Reverse Opposite:

p-value:1e-9
log p-value:-2.280e+01
Information Content per bp:1.897
Number of Target Sequences with motif185.0
Percentage of Target Sequences with motif7.56%
Number of Background Sequences with motif88.3
Percentage of Background Sequences with motif3.48%
Average Position of motif in Targets37.7 +/- 19.6bp
Average Position of motif in Background40.7 +/- 18.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CST6(MacIsaac)/Yeast

Match Rank:1
Score:0.84
Offset:1
Orientation:forward strand
Alignment:AAGCATTT-
-TGCATTTN

YAP5(MacIsaac)/Yeast

Match Rank:2
Score:0.77
Offset:0
Orientation:forward strand
Alignment:AAGCATTT
AAGCAT--

YAP5/MA0417.1/Jaspar

Match Rank:3
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAGCATTT
AAGCAT--

BARHL2/MA0635.1/Jaspar

Match Rank:4
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AAGCATTT---
-ANCGTTTANN

Kr/dmmpmm(SeSiMCMC)/fly

Match Rank:5
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AAGCATTT-
AACCCTTTT

Kr/dmmpmm(Down)/fly

Match Rank:6
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AAGCATTT-
TAACCCTTTT

HAT1/MA1024.1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGCATTT
CCAATCATTA

Kr/MA0452.2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AAGCATTT---
TTTAACCCTTTTTC

Kr/dmmpmm(Bigfoot)/fly

Match Rank:9
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AAGCATTT-
TAACCCTTTT

PB0042.1_Mafk_1/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----AAGCATTT---
AAGTCAGCANTTTTN