Information for 2-CCTCAGCCTCCC (Motif 2)


Reverse Opposite:

p-value:1e-29
log p-value:-6.836e+01
Information Content per bp:1.508
Number of Target Sequences with motif231.0
Percentage of Target Sequences with motif9.44%
Number of Background Sequences with motif54.4
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets38.0 +/- 17.9bp
Average Position of motif in Background39.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

CRZ1(MacIsaac)/Yeast

Match Rank:1
Score:0.73
Offset:3
Orientation:reverse strand
Alignment:CCTCAGCCTCCC
---CAGCCAC--

CRZ1/MA0285.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCTCAGCCTCCC
-CTAAGCCAC--

bZIP910(2)(bZIP)/Antirrhinum majus/AthaMap

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGCCTCCC
ACGTCAGCACCC-

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CCTCAGCCTCCC
GCTCGGSCTC--

SWI5/Literature(Harbison)/Yeast

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCTCAGCCTCCC
--CCAGCA----

ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CCTCAGCCTCCC
ACCACATCCTGT-

ADR1/Literature(Harbison)/Yeast

Match Rank:7
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTCAGCCTCCC
------ACCCCN

ADR1(MacIsaac)/Yeast

Match Rank:8
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:CCTCAGCCTCCC
------ACCCCN

PB0097.1_Zfp281_1/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCTCAGCCTCCC--
TCCCCCCCCCCCCCC

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCTCAGCCTCCC
GCCCCGCCCCC-