Information for 14-CTRKGTAWATAH (Motif 22)


Reverse Opposite:

p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.607
Number of Target Sequences with motif167.0
Percentage of Target Sequences with motif6.82%
Number of Background Sequences with motif80.2
Percentage of Background Sequences with motif3.16%
Average Position of motif in Targets38.3 +/- 19.2bp
Average Position of motif in Background34.7 +/- 21.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXB1/MA0845.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:forward strand
Alignment:CTRKGTAWATAH
-TATGTAAATAT

bin/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.72
Offset:4
Orientation:forward strand
Alignment:CTRKGTAWATAH
----ATAAATA-

Foxa2/MA0047.2/Jaspar

Match Rank:3
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CTRKGTAWATAH
NCTAAGTAAACA-

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CTRKGTAWATAH
-TATGTAAATAT

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CTRKGTAWATAH
-WAAGTAAAYA-

SeqBias: TA-repeat

Match Rank:6
Score:0.70
Offset:1
Orientation:forward strand
Alignment:CTRKGTAWATAH
-TATATATATA-

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.69
Offset:-4
Orientation:forward strand
Alignment:----CTRKGTAWATAH-
NNNVCTGWGYAAACASN

FOXA1/MA0148.3/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CTRKGTAWATAH---
CAAAGTAAACANNNN

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CTRKGTAWATAH
-AAAGTAAACA-

fkh/MA0446.1/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:CTRKGTAWATAH
TTAAGCAAACA-