Information for 15-ACCCAGCCATCC (Motif 26)


Reverse Opposite:

p-value:1e-6
log p-value:-1.598e+01
Information Content per bp:1.773
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif1.31%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets36.9 +/- 19.1bp
Average Position of motif in Background22.4 +/- 10.2bp
Strand Bias (log2 ratio + to - strand density)-1.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

SWI5/MA0402.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:ACCCAGCCATCC
AACCAGCA----

ACE2/MA0267.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:forward strand
Alignment:ACCCAGCCATCC
-ACCAGCA----

SWI5(MacIsaac)/Yeast

Match Rank:3
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:ACCCAGCCATCC
AACCAGCA----

SWI5/Literature(Harbison)/Yeast

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ACCCAGCCATCC
--CCAGCA----

PB0167.1_Sox13_2/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACCCAGCCATCC-
ANNTNCCCACCCANNAC

ACE2(MacIsaac)/Yeast

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:ACCCAGCCATCC
AACCCGCC----

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---ACCCAGCCATCC--
TACGCCCCGCCACTCTG

sma-4/MA0925.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:ACCCAGCCATCC
NNCCAGACANN-

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:ACCCAGCCATCC-----
--SCAGYCADGCATGAC

CRZ1(MacIsaac)/Yeast

Match Rank:10
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ACCCAGCCATCC
---CAGCCAC--