Information for 5-CCATCTCTAC (Motif 4)


Reverse Opposite:

p-value:1e-20
log p-value:-4.784e+01
Information Content per bp:1.658
Number of Target Sequences with motif195.0
Percentage of Target Sequences with motif7.97%
Number of Background Sequences with motif56.5
Percentage of Background Sequences with motif2.23%
Average Position of motif in Targets38.5 +/- 20.7bp
Average Position of motif in Background38.4 +/- 22.2bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown2/Drosophila-Promoters/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCATCTCTAC
-CATCMCTA-

pros/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CCATCTCTAC
-CATGNCT--

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCATCTCTAC
GCCATCTGTT-

Tal1

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCATCTCTAC
-CATCTG---

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:5
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----CCATCTCTAC--
CCNNACCATCTGGCCTN

TOD6?/SacCer-Promoters/Homer

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCATCTCTAC
AKCTCATCGC---

Trl(Zf)/S2-GAGAfactor-ChIP-Seq(GSE40646)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CCATCTCTAC
CTCTCTCY--

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCATCTCTAC
GCNGCCATCTTG--

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCATCTCTAC
RCCATMTGTT-

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CCATCTCTAC
AAATCACTGC