Information for 7-CCACCVTGCC (Motif 5)


Reverse Opposite:

p-value:1e-20
log p-value:-4.763e+01
Information Content per bp:1.633
Number of Target Sequences with motif236.0
Percentage of Target Sequences with motif9.64%
Number of Background Sequences with motif81.9
Percentage of Background Sequences with motif3.23%
Average Position of motif in Targets36.6 +/- 19.3bp
Average Position of motif in Background38.5 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:1
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCACCVTGCC
ATTTCCCAGVAKSCY

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCACCVTGCC
ATCCAC------

ZNF143/MA0088.2/Jaspar

Match Rank:3
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCACCVTGCC---
TACCCACAATGCATTG

MET32/MA0334.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCACCVTGCC
CGCCACA-----

YY1/MA0095.2/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCACCVTGCC
GCNGCCATCTTG--

MET31/MA0333.1/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CCACCVTGCC
CGCCACANN---

YPR022C/MA0436.1/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCACCVTGCC
CCCCACG-----

ALFIN1(HD-PHD)/Medicago sativa/AthaMap

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACCVTGCC
GCCCCACCTC---

pho/dmmpmm(Pollard)/fly

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCACCVTGCC
GAAGCCATAACGGC

RPN4/MA0373.1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCACCVTGCC
CGCCACC-----