Information for 8-TTCAAGYGAT (Motif 6)


Reverse Opposite:

p-value:1e-20
log p-value:-4.744e+01
Information Content per bp:1.755
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif5.96%
Number of Background Sequences with motif31.0
Percentage of Background Sequences with motif1.22%
Average Position of motif in Targets34.9 +/- 18.1bp
Average Position of motif in Background38.4 +/- 25.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

tin/dmmpmm(Bigfoot)/fly

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:TTCAAGYGAT
-TCAAGTG--

vnd/dmmpmm(Noyes_hd)/fly

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTCAAGYGAT
TTTCAAGTGA-

vnd/MA0253.1/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TTCAAGYGAT
TTTCAAGTG--

vnd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:TTCAAGYGAT
CTCAAGTG--

tin/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:TTCAAGYGAT
-TCAAGTG--

tin/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:TTCAAGYGAT
CTCAAGTG--

TYE7/TYE7_YPD/39-CBF1(Harbison)/Yeast

Match Rank:7
Score:0.69
Offset:1
Orientation:forward strand
Alignment:TTCAAGYGAT
-TCACGTGAT

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTCAAGYGAT---
NANTTTCAAGTGGTTAN

NTL9/MA1046.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:TTCAAGYGAT
-TTAAGTAAT

ceh-22/MA0264.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TTCAAGYGAT
TTTCAAGTGGN