Information for 7-GGGAAGTC (Motif 9)


Reverse Opposite:

p-value:1e-16
log p-value:-3.785e+01
Information Content per bp:1.787
Number of Target Sequences with motif164.0
Percentage of Target Sequences with motif6.70%
Number of Background Sequences with motif50.8
Percentage of Background Sequences with motif2.00%
Average Position of motif in Targets35.7 +/- 21.4bp
Average Position of motif in Background33.4 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GCR2/MA0305.1/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGAAGTC
NGGAAGC-

GCR1(MacIsaac)/Yeast

Match Rank:2
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:GGGAAGTC-
TGGAAGCCC

GCR2(MacIsaac)/Yeast

Match Rank:3
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GGGAAGTC
NGGAAGC-

GCR1/MA0304.1/Jaspar

Match Rank:4
Score:0.80
Offset:0
Orientation:forward strand
Alignment:GGGAAGTC
TGGAAGCC

PB0058.1_Sfpi1_1/Jaspar

Match Rank:5
Score:0.79
Offset:-5
Orientation:forward strand
Alignment:-----GGGAAGTC-
TTAAGAGGAAGTTA

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:6
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---GGGAAGTC
AVCAGGAAGT-

dl-B/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAGTC--
GGGGAATTCCC

ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer

Match Rank:8
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GGGAAGTC
ACVAGGAAGT-

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGGAAGTC
NACCGGAAGT-

ELF5/MA0136.2/Jaspar

Match Rank:10
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---GGGAAGTC
ACCCGGAAGTA