Information for 1-GGGCATGGTG (Motif 1)


Reverse Opposite:

p-value:1e-17
log p-value:-4.099e+01
Information Content per bp:1.660
Number of Target Sequences with motif207.0
Percentage of Target Sequences with motif5.42%
Number of Background Sequences with motif72.9
Percentage of Background Sequences with motif1.83%
Average Position of motif in Targets35.8 +/- 18.1bp
Average Position of motif in Background41.8 +/- 19.5bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0039.1_Klf7_1/Jaspar

Match Rank:1
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----GGGCATGGTG--
NNAGGGGCGGGGTNNA

Klf12/MA0742.1/Jaspar

Match Rank:2
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGGCATGGTG
NANAAGGGCGTGGTC

SP3/MA0746.1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--GGGCATGGTG
GGGGGCGTGGN-

SP8/MA0747.1/Jaspar

Match Rank:4
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GGGCATGGTG
AGTGGGCGTGGC-

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GGGCATGGTG
NGTGGGCAT----

Klf4/MA0039.2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGGCATGGTG
TGGGTGGGGC-

KLF14/MA0740.1/Jaspar

Match Rank:7
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GGGCATGGTG
AAGGGGGCGTGGCC

KLF16/MA0741.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GGGCATGGTG
GGGGGCGTGGC-

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:9
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-GGGCATGGTG
DGGGYGKGGC-

LEC2/MA0581.1/Jaspar

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GGGCATGGTG
ATGTGCATGNN-