Information for 6-GAATCTCTGGAA (Motif 10)


Reverse Opposite:

p-value:1e-7
log p-value:-1.737e+01
Information Content per bp:1.789
Number of Target Sequences with motif34.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets35.4 +/- 17.6bp
Average Position of motif in Background46.1 +/- 14.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat6/MA0520.1/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAATCTCTGGAA---
ANTTCTCAGGAANNN

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GAATCTCTGGAA
--TTCTNMGGAA

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GAATCTCTGGAA--
--TTCTNNAGAANT

GSM1/MA0308.1/Jaspar

Match Rank:4
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GAATCTCTGGAA----
ATTAAAAAACTCCGGAGTATA

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GAATCTCTGGAA
CAAATCACTG---

PB0195.1_Zbtb3_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAATCTCTGGAA----
CAATCACTGGCAGAAT

HSF1/MA0319.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GAATCTCTGGAA--
------ATGGAACA

ARR1/MA0945.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GAATCTCTGGAA
AGCGAATCTT-----

Stat92E/MA0532.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATCTCTGGAA-
CGGAATTCCAGGAAA

ARR2/MA0949.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GAATCTCTGGAA
GCGAATCTTT----