Information for 10-TGTTTGCTGG (Motif 11)


Reverse Opposite:

p-value:1e-7
log p-value:-1.725e+01
Information Content per bp:1.816
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets40.0 +/- 19.5bp
Average Position of motif in Background39.2 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PHA-4(Forkhead)/cElegans-Embryos-PHA4-ChIP-Seq(modEncode)/Homer

Match Rank:1
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TGTTTGCTGG
KTGTTTGC---

SWI5(MacIsaac)/Yeast

Match Rank:2
Score:0.74
Offset:4
Orientation:forward strand
Alignment:TGTTTGCTGG--
----TGCTGGTT

ACE2/MA0267.1/Jaspar

Match Rank:3
Score:0.73
Offset:4
Orientation:reverse strand
Alignment:TGTTTGCTGG-
----TGCTGGT

SWI5/MA0402.1/Jaspar

Match Rank:4
Score:0.73
Offset:4
Orientation:forward strand
Alignment:TGTTTGCTGG--
----TGCTGGTT

ACE2/ACE2_YPD/2-SWI5(Harbison)/Yeast

Match Rank:5
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TGTTTGCTGG-
----TGCTGGT

SWI5/Literature(Harbison)/Yeast

Match Rank:6
Score:0.70
Offset:4
Orientation:forward strand
Alignment:TGTTTGCTGG
----GGCTGA

FOXP3/MA0850.1/Jaspar

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTGG
TGTTTAC---

fkh/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTGG-
TGTTTGCNTAA

FOXD2/MA0847.1/Jaspar

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:TGTTTGCTGG
TGTTTAC---

CUP2/MA0287.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGTTTGCTGG
CATTTCTGCTG-