Information for 12-TCMAGGCTGK (Motif 15)


Reverse Opposite:

p-value:1e-7
log p-value:-1.647e+01
Information Content per bp:1.683
Number of Target Sequences with motif177.0
Percentage of Target Sequences with motif4.64%
Number of Background Sequences with motif97.9
Percentage of Background Sequences with motif2.45%
Average Position of motif in Targets35.9 +/- 19.2bp
Average Position of motif in Background36.8 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

YML081W(MacIsaac)/Yeast

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TCMAGGCTGK-
-CCAGTCTGAA

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCMAGGCTGK-
-----GCTGTG

SWI5/Literature(Harbison)/Yeast

Match Rank:3
Score:0.62
Offset:4
Orientation:forward strand
Alignment:TCMAGGCTGK
----GGCTGA

CRZ1(MacIsaac)/Yeast

Match Rank:4
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCMAGGCTGK
--GAGGCTG-

ACE2/MA0267.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TCMAGGCTGK-
----TGCTGGT

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TCMAGGCTGK
-CCAGACAG-

SWI5/MA0402.1/Jaspar

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:TCMAGGCTGK--
----TGCTGGTT

SWI5(MacIsaac)/Yeast

Match Rank:8
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TCMAGGCTGK--
----TGCTGGTT

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TCMAGGCTGK
--TWGTCTGV

Tag/dmmpmm(Papatsenko)/fly

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCMAGGCTGK
--CAGGTAG-