Information for 13-AGTCATGGGA (Motif 17)


Reverse Opposite:

p-value:1e-7
log p-value:-1.612e+01
Information Content per bp:1.770
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif0.97%
Number of Background Sequences with motif5.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets30.5 +/- 17.6bp
Average Position of motif in Background30.7 +/- 19.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ASH1/Literature(Harbison)/Yeast

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AGTCATGGGA
AGTCAA----

pros/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AGTCATGGGA
AGNCATG---

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:AGTCATGGGA
-GTCATN---

GCN4(MacIsaac)/Yeast

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATGGGA
TGAGTCAT----

BAS1/BAS1_SM/2-BAS1(Harbison)/Yeast

Match Rank:5
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-AGTCATGGGA
GAGTCA-----

prd/dmmpmm(Pollard)/fly

Match Rank:6
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGTCATGGGA
NGTAATGG--

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGTCATGGGA
AGTCACGC--

ARG81/MA0272.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATGGGA
NGAGTCAC----

ARG81(MacIsaac)/Yeast

Match Rank:9
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AGTCATGGGA
NGAGTCAC----

BAS1(MacIsaac)/Yeast

Match Rank:10
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----AGTCATGGGA
GNAAGAGTCA-----